Seg3D
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SCIInstitute
Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the University of Utah Scientific Computing and Imaging (SCI) Institute.
- [x] large volume - [ ] more python examples - [ ] isosurface transparency documented? - [x] new tools - [ ] ninja build supported
Look at consolidating some or all layer tools into a common toolbar (dockable, floating?) instead of repeating tool instances in each layer to unclutter layer manager.
- [ ] Unit tests for exporter base class - [ ] Unit tests for export actions - [ ] Consolidate cut and paste exporter code for managing label values...
Need unit tests for layer import classes. Segmentation import especially...
I would like to have a tool to combine volumes. Often, clinical scans are acquired in multiple volumes, and we need to combine them. currently, this is tricky to do...
Related to #365, but with the ability to actually handle and visualize the data in Seg3D. Features to include: Remapping Arbitrary axis visualization Handle going through slices when they aren't...
Ability to read in off-axis data and be able to save onto the same axis.
- [ ] Ability to separate multiple volumes in the same folder - [ ] Read in time series data such as: DWI/DTI and fMRI (can use for registration)
Needed for mosaic tools.
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Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the University of Utah Scientific Computing and Imaging (SCI) Institute.