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Outdated scanpy dependency
Thank you for your cool package. I've been experimenting with it on my own data lately.
The issue that arose after installing it (from PyPI) is that the 'scanpy==1.4.6' dependency is quite outdated. Downgrade of scanpy caused some issues that scanpy team already fixed, i.e. https://github.com/theislab/scanpy/issues/1486.
Could you bump the dependencies in order to avoid this issue?
Thanks.. I am using this module for my analysis but it uses scanpy==1.4.6 if i use upgraded version of scanpy this program fails.
can you please update this scanpy version to recent ones.
Using this version i am not able to calculate the "pts" from scanpy it only works 1.8 above
T