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Intuitive coloring of protein structures

Open nmih opened this issue 7 years ago • 1 comments

Protein structures in NGLview could be colored by their quality, eg. red for homology models and silver for experimental models. This gives a quick idea on the quality of information being presented. Other ideas

  • "figure legend" type of thing displaying quality information (c-score, basic PDB quality)
  • running QMEAN for all structures and reporting quality this way
  • coloring certain residues based on quality (b-factor)

nmih avatar Mar 16 '17 01:03 nmih

Also see: http://www.rcsb.org/pdb/news.do?year=2016&article=57e30aee90f5613003407f08&feature=true - coloring by quality metrics

nmih avatar Apr 04 '17 23:04 nmih