MUMandCo
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Check insertion and deletion blast files
In many instances, no deletions or insertions are present in blast files, resulting in errors reported by cat
and rm
. For example:
cat: test.deletion_blast: No such file or directory
rm: cannot remove 'ref_segment.fa': No such file or directory
rm: cannot remove 'temp.blast2': No such file or directory
Now, insertion and deletion blast files are only sorted (and later removed) when they exist.