Runyu Xia

What information is stored in adata.varm['tacco_key']

1

Hi! I was wondering if you could help me understand how to interpret the information stored in adata.varm['tacco_key'] after running TACCO. What exactly does it represent? Thanks so much!

use scVI for slingshot

1

Hi! I wanted to ask whether it is appropriate to use the scVI embedding directly as input for Slingshot. Or would it be better to perform additional dimensionality reduction, such...