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Published 20 hours ago • verified publisher icon Rostlab
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Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer annotations from a set of labeled lookup protein embeddings to que...

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Download pre-computed lookup embeddings

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Dear @mheinzinger Where can I download the pre-computed lookup embeddings for the databases? https://github.com/Rostlab/EAT/tree/main?tab=readme-ov-file#pre-computed-lookup-embeddings

pranavathiyani avatar pranavathiyani

Floating point conversion issue with `use_tucker`

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The following works fine for me: ``` python eat.py --lookup test.fasta --queries test.fasta --output test/ ``` But when I add `--use_tucker 1` I get: ``` Start loading ProtT5... Finished loading...

jgreener64 avatar jgreener64

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verified publisher icon Rostlab

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Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer annotations from a set of labeled lookup protein embeddings to que...

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