Rohit Satyam

Results 67 issues of Rohit Satyam

Dear @jenniferlu717 I have been using Bracken for a long time but recently something changed. I have clinical COVID RNAseq samples (380) and I realized that in many samples Bracken...

Hi Developers!! I am trying to use SWGA and I download it via `conda`. I was testing the tool but it seems to take forever to run `swga find_sets.` Please...

I was wondering what was the reason behind not adding Archaeal tab to Pavian. I thought Bacteria and Archaea results were under the tab Bacteria, but I couldn't find them...

Hi I was using Chirps to get precipitation data of India but I keep on running into the following error: ```r Fetching data from ClimateSERV Getting your request... Error in...

Hi !! I was trying to use the updated version of PERF and use the new feature for one of my bacterial strains. However, I am getting the following error...

Hi DCA developers I am writing this as a humble request to fix the dca dependency issue related to tensorflow and keras. It seems like a never ending cycle of...

Hello Developers and Maintainers!! @mojaveazure @rcannood @JunZhao1990 @inoue0426 @linqiaozhi I ran into an issue while trying to use `ALRAChooseKPlot` function as follows: ```r > Assays(t) [1] "RNA" "integrated" > DefaultAssay(t)...

Hi @linqiaozhi @JunZhao1990 @rcannood @inoue0426 I was following this [issue](https://github.com/satijalab/seurat/issues/1016) where @ChristophH mentions that > Results should not be very different from using the original "count" data. Generally, using "data"...

Requesting @jwokaty to review and suggest changes in the .Rmd file, if required.

Hi, I'm volunteering with Sweave2Rmd and we're trying to convert all Bioconductor Sweave vignettes into Rmd files. Would you be willing to accept a pull request converting "ggbio: visualization toolkits...