Ralf Gabriels
Ralf Gabriels
With v3.0.0b1 of the Windows Installer: ```Traceback (most recent call last): File "ms2rescore\gui\__main__.py", line 15, in main() File "ms2rescore\gui\__main__.py", line 10, in main multiprocessing.freeze_support() File "Lib\site-packages\PyInstaller\hooks\rthooks\pyi_rth_multiprocessing.py", line 47, in _freeze_support...
### Added - CI: Add integration test for `predict-single` ### Changed - Build with backwards-compatible Numpy v2, allow newer versions of Numpy, Pandas, and XGBoost at runtime
I couldn't find any references to SciPy except for the dependency list. Is it required?
In the GUI, in debug mode, keras tries to write its progress bar, but fails. In non-debug mode, this is not an issue, most likely due to the redirect to...
Hi OpenMS team, Thanks for the great work! Our [most recent build](https://github.com/compomics/ms2rescore/actions/runs/11127513573/job/30920124944) of MS²Rescore, using pyOpenMS 3.2, failed with an `ImportError`: ``` File "C:\hostedtoolcache\windows\Python\3.11.9\x64\Lib\site-packages\psm_utils\io\idxml.py", line 33, in import pyopenms as...
When adding a ProForma sequence with a terminal modification (e.g., `[+304.207].AINEAYK[+304.207]EDYHK[+304.207]`), the `strip_peptide` function does not remove the dash that indicates the N-terminal modification. This breaks peptide-protein mapping downstream (for...
In a project where we combine XGBoost with Tensorflow within the same process, we ran into the following issue: When the environment variable `CUDA_VISIBLE_DEVICES` is set to `-1`, the XGBoost...