RTX
RTX copied to clipboard
RTXteam
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
I noticed the following in the Translator weekly recap. I was not present when this was discussed. • Suggestions for ARAX UI improvement o Would it be difficult to add...
Based on the KG2.6.1c (http://kg2canonicalized.rtx.ai:7474/browser/) that @amykglen just built, I found that the nodes which are labelled as `deprecated` in KG2.6.1 are still used in KG2.6.1c. There are total 42,431...
ICEES+ API is returning 422 responses ("Unprocessable Entity") for queries that previously worked. This can be observed in `master` with: ``` pytest -v -s test_ARAX_overlay.py -k test_overlay_exposures ``` (Look at...
So, when running this DSL query on `arax-backup.rtx.ai` (the `production` dev-area) last night: ``` add_qnode(name=arthritis, key=n00) add_qnode(categories=biolink:Protein, is_set=true, key=n01) add_qnode(categories=biolink:ChemicalEntity, key=n02) add_qedge(subject=n00, object=n01, key=e00) add_qedge(subject=n01, object=n02, key=e01, predicates=biolink:physically_interacts_with) expand(edge_key=[e00,e01], kp=RTX-KG2)...
With the new TRAPI 1.2 /asyncquery scheme, the ARA should come back with a Response status = "Running". Even though the ARS lists the status as "DONE", the query is...