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ONNX V1.11.0 Failure - Inference with vx_nn
ONNX version 1.11.0 fails to install on Ubuntu 22.04, upgrading to latest 1.14.1 does not work well with caffe. Need to find a version that we can upgrade to.
sudo pip3 install protobuf==3.12.4 onnx==1.11.0
Collecting protobuf==3.12.4
Using cached protobuf-3.12.4-py2.py3-none-any.whl (443 kB)
Collecting onnx==1.11.0
Using cached onnx-1.11.0.tar.gz (9.9 MB)
Preparing metadata (setup.py) ... done
Requirement already satisfied: six>=1.9 in /usr/local/lib/python3.10/dist-packages (from protobuf==3.12.4) (1.16.0)
Requirement already satisfied: setuptools in /usr/lib/python3/dist-packages (from protobuf==3.12.4) (59.6.0)
Requirement already satisfied: numpy>=1.16.6 in /usr/local/lib/python3.10/dist-packages (from onnx==1.11.0) (1.21.0)
Requirement already satisfied: typing-extensions>=3.6.2.1 in /usr/local/lib/python3.10/dist-packages (from onnx==1.11.0) (4.8.0)
Building wheels for collected packages: onnx
Building wheel for onnx (setup.py) ... error
error: subprocess-exited-with-error
× python setup.py bdist_wheel did not run successfully.
│ exit code: 1
╰─> [212 lines of output]
fatal: not a git repository (or any of the parent directories): .git
/usr/lib/python3/dist-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
running bdist_wheel
running build
running build_py
running create_version
running cmake_build
Using cmake args: ['/usr/bin/cmake', '-DPYTHON_INCLUDE_DIR=/usr/include/python3.10', '-DPYTHON_EXECUTABLE=/usr/bin/python3', '-DBUILD_ONNX_PYTHON=ON', '-DCMAKE_EXPORT_COMPILE_COMMANDS=ON', '-DONNX_NAMESPACE=onnx', '-DPY_EXT_SUFFIX=.cpython-310-x86_64-linux-gnu.so', '-DCMAKE_BUILD_TYPE=Release', '-DONNX_ML=1', '/tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9']
-- The C compiler identification is GNU 11.4.0
-- The CXX compiler identification is GNU 11.4.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found PythonInterp: /usr/bin/python3 (found version "3.10.12")
-- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython3.10.so (found version "3.10.12")
-- Found Protobuf: /usr/lib/x86_64-linux-gnu/libprotobuf.a (found version "3.12.4")
Generated: /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-ml.proto
Generated: /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-operators-ml.proto
Generated: /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-data.proto
-- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython3.10.so
-- Performing Test HAS_FLTO
-- Performing Test HAS_FLTO - Success
-- Found pybind11: /usr/include (found version "2.9.1")
--
-- ******** Summary ********
-- CMake version : 3.22.1
-- CMake command : /usr/bin/cmake
-- System : Linux
-- C++ compiler : /usr/bin/c++
-- C++ compiler version : 11.4.0
-- CXX flags : -Wnon-virtual-dtor
-- Build type : Release
-- Compile definitions : __STDC_FORMAT_MACROS
-- CMAKE_PREFIX_PATH :
-- CMAKE_INSTALL_PREFIX : /usr/local
-- CMAKE_MODULE_PATH :
--
-- ONNX version : 1.11.0
-- ONNX NAMESPACE : onnx
-- ONNX_USE_LITE_PROTO : OFF
-- USE_PROTOBUF_SHARED_LIBS : OFF
-- Protobuf_USE_STATIC_LIBS : ON
-- ONNX_DISABLE_EXCEPTIONS : OFF
-- ONNX_WERROR : OFF
-- ONNX_BUILD_TESTS : OFF
-- ONNX_BUILD_BENCHMARKS : OFF
-- ONNXIFI_DUMMY_BACKEND : OFF
-- ONNXIFI_ENABLE_EXT : OFF
--
-- Protobuf compiler : /usr/bin/protoc
-- Protobuf includes : /usr/include
-- Protobuf libraries : /usr/lib/x86_64-linux-gnu/libprotobuf.a
-- BUILD_ONNX_PYTHON : ON
-- Python version :
-- Python executable : /usr/bin/python3
-- Python includes : /usr/include/python3.10
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build
[ 1%] Building C object CMakeFiles/onnxifi_dummy.dir/onnx/onnxifi_dummy.c.o
[ 2%] Running gen_proto.py on onnx/onnx.in.proto
[ 4%] Building C object CMakeFiles/onnxifi_loader.dir/onnx/onnxifi_loader.c.o
Processing /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/onnx/onnx.in.proto
Writing /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-ml.proto
Writing /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-ml.proto3
generating /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx_pb.py
[ 5%] Linking C static library libonnxifi_loader.a
[ 7%] Running C++ protocol buffer compiler on /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-ml.proto
[ 8%] Linking C shared library libonnxifi_dummy.so
[ 8%] Built target onnxifi_dummy
[ 8%] Built target onnxifi_loader
[ 9%] Building C object CMakeFiles/onnxifi_wrapper.dir/onnx/onnxifi_wrapper.c.o
Writing mypy to onnx/onnx_ml_pb2.pyi
[ 9%] Built target gen_onnx_proto
[ 11%] Running gen_proto.py on onnx/onnx-operators.in.proto
[ 12%] Running gen_proto.py on onnx/onnx-data.in.proto
Processing /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/onnx/onnx-operators.in.proto
Writing /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-operators-ml.proto
Writing /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-operators-ml.proto3
generating /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx_operators_pb.py
Processing /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/onnx/onnx-data.in.proto
Writing /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-data.proto
Writing /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-data.proto3
generating /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx_data_pb.py
[ 14%] Running C++ protocol buffer compiler on /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-operators-ml.proto
[ 15%] Running C++ protocol buffer compiler on /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-data.proto
[ 16%] Linking C shared module libonnxifi.so
Writing mypy to onnx/onnx_operators_ml_pb2.pyi
Writing mypy to onnx/onnx_data_pb2.pyi
[ 16%] Built target onnxifi_wrapper
[ 16%] Built target gen_onnx_operators_proto
[ 16%] Built target gen_onnx_data_proto
[ 18%] Building CXX object CMakeFiles/onnx_proto.dir/onnx/onnx-ml.pb.cc.o
[ 19%] Building CXX object CMakeFiles/onnx_proto.dir/onnx/onnx-operators-ml.pb.cc.o
[ 21%] Building CXX object CMakeFiles/onnx_proto.dir/onnx/onnx-data.pb.cc.o
[ 22%] Linking CXX static library libonnx_proto.a
[ 30%] Built target onnx_proto
[ 32%] Building CXX object CMakeFiles/onnx.dir/onnx/common/path.cc.o
[ 33%] Building CXX object CMakeFiles/onnx.dir/onnx/common/interned_strings.cc.o
[ 35%] Building CXX object CMakeFiles/onnx.dir/onnx/common/assertions.cc.o
[ 38%] Building CXX object CMakeFiles/onnx.dir/onnx/common/ir_pb_converter.cc.o
[ 38%] Building CXX object CMakeFiles/onnx.dir/onnx/common/model_helpers.cc.o
[ 39%] Building CXX object CMakeFiles/onnx.dir/onnx/checker.cc.o
[ 40%] Building CXX object CMakeFiles/onnx.dir/onnx/common/status.cc.o
[ 43%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/data_type_utils.cc.o
[ 43%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/controlflow/old.cc.o
[ 45%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/generator/defs.cc.o
[ 46%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/controlflow/defs.cc.o
[ 47%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/attr_proto_util.cc.o
[ 49%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/function.cc.o
[ 50%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/logical/defs.cc.o
[ 52%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/generator/old.cc.o
[ 53%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/logical/old.cc.o
[ 54%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/math/defs.cc.o
[ 56%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/math/old.cc.o
[ 57%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/nn/defs.cc.o
[ 59%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/nn/old.cc.o
[ 61%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/object_detection/old.cc.o
[ 61%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/object_detection/defs.cc.o
[ 63%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/optional/defs.cc.o
In file included from /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/onnx/common/ir_pb_converter.h:10,
from /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/onnx/common/ir_pb_converter.cc:8:
In constructor ‘onnx::Dimension::Dimension(onnx::Dimension&&)’,
inlined from ‘void __gnu_cxx::new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = onnx::Dimension; _Args = {onnx::Dimension}; _Tp = onnx::Dimension]’ at /usr/include/c++/11/ext/new_allocator.h:162:4,
inlined from ‘static void std::allocator_traits<std::allocator<_CharT> >::construct(std::allocator_traits<std::allocator<_CharT> >::allocator_type&, _Up*, _Args&& ...) [with _Up = onnx::Dimension; _Args = {onnx::Dimension}; _Tp = onnx::Dimension]’ at /usr/include/c++/11/bits/alloc_traits.h:516:17,
inlined from ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {onnx::Dimension}; _Tp = onnx::Dimension; _Alloc = std::allocator<onnx::Dimension>]’ at /usr/include/c++/11/bits/vector.tcc:115:30,
inlined from ‘void std::vector<_Tp, _Alloc>::push_back(std::vector<_Tp, _Alloc>::value_type&&) [with _Tp = onnx::Dimension; _Alloc = std::allocator<onnx::Dimension>]’ at /usr/include/c++/11/bits/stl_vector.h:1204:21,
inlined from ‘std::vector<onnx::Dimension> onnx::tensorShapeProtoToDimensions(const onnx::TensorShapeProto&)’ at /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/onnx/common/ir_pb_converter.cc:201:21:
/tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/onnx/common/ir.h:74:8: warning: ‘<unnamed>.onnx::Dimension::dim’ may be used uninitialized [-Wmaybe-uninitialized]
74 | struct Dimension final {
| ^~~~~~~~~
/tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/onnx/common/ir_pb_converter.cc: In function ‘std::vector<onnx::Dimension> onnx::tensorShapeProtoToDimensions(const onnx::TensorShapeProto&)’:
/tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/onnx/common/ir_pb_converter.cc:201:32: note: ‘<anonymous>’ declared here
201 | dims.push_back(Dimension());
| ^
[ 67%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/printer.cc.o
[ 67%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/quantization/old.cc.o
[ 67%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/parser.cc.o
[ 69%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/quantization/defs.cc.o
[ 70%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/reduction/defs.cc.o
[ 71%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/reduction/old.cc.o
[ 73%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/rnn/defs.cc.o
[ 74%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/rnn/old.cc.o
[ 76%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/schema.cc.o
[ 77%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/sequence/defs.cc.o
[ 78%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/shape_inference.cc.o
[ 80%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/tensor/defs.cc.o
[ 81%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/tensor/old.cc.o
[ 83%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/tensor/utils.cc.o
[ 84%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/tensor_proto_util.cc.o
[ 85%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/tensor_util.cc.o
[ 87%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/traditionalml/defs.cc.o
[ 88%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/traditionalml/old.cc.o
[ 90%] Building CXX object CMakeFiles/onnx.dir/onnx/defs/training/defs.cc.o
[ 91%] Building CXX object CMakeFiles/onnx.dir/onnx/onnxifi_utils.cc.o
[ 92%] Building CXX object CMakeFiles/onnx.dir/onnx/shape_inference/implementation.cc.o
[ 94%] Building CXX object CMakeFiles/onnx.dir/onnx/version_converter/convert.cc.o
[ 95%] Building CXX object CMakeFiles/onnx.dir/onnx/version_converter/helper.cc.o
[ 97%] Linking CXX static library libonnx.a
[ 97%] Built target onnx
[ 98%] Building CXX object CMakeFiles/onnx_cpp2py_export.dir/onnx/cpp2py_export.cc.o
[100%] Linking CXX shared module onnx_cpp2py_export.cpython-310-x86_64-linux-gnu.so
/usr/bin/ld: /usr/lib/x86_64-linux-gnu/libprotobuf.a(arena.o): relocation R_X86_64_TPOFF32 against hidden symbol `_ZN6google8protobuf8internal9ArenaImpl13thread_cache_E' can not be used when making a shared object
/usr/bin/ld: failed to set dynamic section sizes: bad value
collect2: error: ld returned 1 exit status
gmake[2]: *** [CMakeFiles/onnx_cpp2py_export.dir/build.make:101: onnx_cpp2py_export.cpython-310-x86_64-linux-gnu.so] Error 1
gmake[1]: *** [CMakeFiles/Makefile2:229: CMakeFiles/onnx_cpp2py_export.dir/all] Error 2
gmake: *** [Makefile:136: all] Error 2
Traceback (most recent call last):
File "<string>", line 2, in <module>
File "<pip-setuptools-caller>", line 34, in <module>
File "/tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/setup.py", line 336, in <module>
setuptools.setup(
File "/usr/lib/python3/dist-packages/setuptools/__init__.py", line 153, in setup
return distutils.core.setup(**attrs)
File "/usr/lib/python3.10/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib/python3.10/distutils/dist.py", line 966, in run_commands
self.run_command(cmd)
File "/usr/lib/python3.10/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 299, in run
self.run_command('build')
File "/usr/lib/python3.10/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.10/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/usr/lib/python3.10/distutils/command/build.py", line 135, in run
self.run_command(cmd_name)
File "/usr/lib/python3.10/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.10/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/setup.py", line 232, in run
self.run_command('cmake_build')
File "/usr/lib/python3.10/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.10/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/setup.py", line 226, in run
subprocess.check_call(build_args)
File "/usr/lib/python3.10/subprocess.py", line 369, in check_call
raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['/usr/bin/cmake', '--build', '.', '--', '-j', '16']' returned non-zero exit status 2.
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for onnx
Running setup.py clean for onnx
Failed to build onnx
Installing collected packages: protobuf, onnx
Attempting uninstall: protobuf
Found existing installation: protobuf 4.24.3
Uninstalling protobuf-4.24.3:
Successfully uninstalled protobuf-4.24.3
Attempting uninstall: onnx
Found existing installation: onnx 1.14.1
Uninstalling onnx-1.14.1:
Successfully uninstalled onnx-1.14.1
Running setup.py install for onnx ... error
error: subprocess-exited-with-error
× Running setup.py install for onnx did not run successfully.
│ exit code: 1
╰─> [110 lines of output]
fatal: not a git repository (or any of the parent directories): .git
/usr/lib/python3/dist-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
running install
/usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
warnings.warn(
running build
running build_py
running create_version
running cmake_build
Using cmake args: ['/usr/bin/cmake', '-DPYTHON_INCLUDE_DIR=/usr/include/python3.10', '-DPYTHON_EXECUTABLE=/usr/bin/python3', '-DBUILD_ONNX_PYTHON=ON', '-DCMAKE_EXPORT_COMPILE_COMMANDS=ON', '-DONNX_NAMESPACE=onnx', '-DPY_EXT_SUFFIX=.cpython-310-x86_64-linux-gnu.so', '-DCMAKE_BUILD_TYPE=Release', '-DONNX_ML=1', '/tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9']
Generated: /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-ml.proto
Generated: /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-operators-ml.proto
Generated: /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build/onnx/onnx-data.proto
-- Found pybind11: /usr/include (found version "2.9.1")
--
-- ******** Summary ********
-- CMake version : 3.22.1
-- CMake command : /usr/bin/cmake
-- System : Linux
-- C++ compiler : /usr/bin/c++
-- C++ compiler version : 11.4.0
-- CXX flags : -Wnon-virtual-dtor
-- Build type : Release
-- Compile definitions : __STDC_FORMAT_MACROS
-- CMAKE_PREFIX_PATH :
-- CMAKE_INSTALL_PREFIX : /usr/local
-- CMAKE_MODULE_PATH :
--
-- ONNX version : 1.11.0
-- ONNX NAMESPACE : onnx
-- ONNX_USE_LITE_PROTO : OFF
-- USE_PROTOBUF_SHARED_LIBS : OFF
-- Protobuf_USE_STATIC_LIBS : ON
-- ONNX_DISABLE_EXCEPTIONS : OFF
-- ONNX_WERROR : OFF
-- ONNX_BUILD_TESTS : OFF
-- ONNX_BUILD_BENCHMARKS : OFF
-- ONNXIFI_DUMMY_BACKEND : OFF
-- ONNXIFI_ENABLE_EXT : OFF
--
-- Protobuf compiler : /usr/bin/protoc
-- Protobuf includes : /usr/include
-- Protobuf libraries : /usr/lib/x86_64-linux-gnu/libprotobuf.a
-- BUILD_ONNX_PYTHON : ON
-- Python version :
-- Python executable : /usr/bin/python3
-- Python includes : /usr/include/python3.10
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/.setuptools-cmake-build
Consolidate compiler generated dependencies of target onnxifi_dummy
Consolidate compiler generated dependencies of target onnxifi_loader
[ 2%] Built target gen_onnx_proto
[ 5%] Built target onnxifi_dummy
[ 8%] Built target onnxifi_loader
Consolidate compiler generated dependencies of target onnxifi_wrapper
[ 11%] Built target gen_onnx_data_proto
[ 14%] Built target gen_onnx_operators_proto
[ 16%] Built target onnxifi_wrapper
Consolidate compiler generated dependencies of target onnx_proto
[ 30%] Built target onnx_proto
Consolidate compiler generated dependencies of target onnx
[ 97%] Built target onnx
Consolidate compiler generated dependencies of target onnx_cpp2py_export
[ 98%] Linking CXX shared module onnx_cpp2py_export.cpython-310-x86_64-linux-gnu.so
/usr/bin/ld: /usr/lib/x86_64-linux-gnu/libprotobuf.a(arena.o): relocation R_X86_64_TPOFF32 against hidden symbol `_ZN6google8protobuf8internal9ArenaImpl13thread_cache_E' can not be used when making a shared object
/usr/bin/ld: failed to set dynamic section sizes: bad value
collect2: error: ld returned 1 exit status
gmake[2]: *** [CMakeFiles/onnx_cpp2py_export.dir/build.make:101: onnx_cpp2py_export.cpython-310-x86_64-linux-gnu.so] Error 1
gmake[1]: *** [CMakeFiles/Makefile2:229: CMakeFiles/onnx_cpp2py_export.dir/all] Error 2
gmake: *** [Makefile:136: all] Error 2
Traceback (most recent call last):
File "<string>", line 2, in <module>
File "<pip-setuptools-caller>", line 34, in <module>
File "/tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/setup.py", line 336, in <module>
setuptools.setup(
File "/usr/lib/python3/dist-packages/setuptools/__init__.py", line 153, in setup
return distutils.core.setup(**attrs)
File "/usr/lib/python3.10/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib/python3.10/distutils/dist.py", line 966, in run_commands
self.run_command(cmd)
File "/usr/lib/python3.10/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/usr/lib/python3/dist-packages/setuptools/command/install.py", line 68, in run
return orig.install.run(self)
File "/usr/lib/python3.10/distutils/command/install.py", line 619, in run
self.run_command('build')
File "/usr/lib/python3.10/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.10/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/usr/lib/python3.10/distutils/command/build.py", line 135, in run
self.run_command(cmd_name)
File "/usr/lib/python3.10/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.10/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/setup.py", line 232, in run
self.run_command('cmake_build')
File "/usr/lib/python3.10/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.10/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/tmp/pip-install-uf25ymi0/onnx_2c0ec60173f24e0b824cd80d4310ace9/setup.py", line 226, in run
subprocess.check_call(build_args)
File "/usr/lib/python3.10/subprocess.py", line 369, in check_call
raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['/usr/bin/cmake', '--build', '.', '--', '-j', '16']' returned non-zero exit status 2.
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
WARNING: No metadata found in /usr/local/lib/python3.10/dist-packages
Rolling back uninstall of onnx
Moving to /usr/local/bin/backend-test-tools
from /tmp/pip-uninstall-fgi217q0/backend-test-tools
Moving to /usr/local/bin/check-model
from /tmp/pip-uninstall-fgi217q0/check-model
Moving to /usr/local/bin/check-node
from /tmp/pip-uninstall-fgi217q0/check-node
Moving to /usr/local/lib/python3.10/dist-packages/onnx-1.14.1.dist-info/
from /usr/local/lib/python3.10/dist-packages/~nnx-1.14.1.dist-info
Moving to /usr/local/lib/python3.10/dist-packages/onnx/
from /usr/local/lib/python3.10/dist-packages/~nnx
error: legacy-install-failure
× Encountered error while trying to install package.
╰─> onnx
note: This is an issue with the package mentioned above, not pip.
hint: See above for output from the failure.
Upgrading to sudo pip3 install protobuf==3.20.2 onnx==1.13.0 seems to work better. @hansely needs to verify. @paveltc need to test.
@kiritigowda Isn't caffe and onnx independent of each other? How does changing the onnx version affect caffe?
@hansely ONNX deps for 1.11.0 is different from 1.13.0, these deps are common for caffe & ONNX.
@kiritigowda Using protobuf==3.20.2 / onnx==1.13.0 version works well for both caffe & onnx models. We can close the issue after updating the setup script.
Updated to ONNX 1.12.0 on TOT; maybe we can move to 1.13.0 -- Link issue to #1171
-- ******** Summary ********
-- CMake version : 3.20.4
-- CMake command : /usr/bin/cmake
-- System : Linux
-- C++ compiler : /usr/bin/c++
-- C++ compiler version : 7.5.0
-- CXX flags : -Wnon-virtual-dtor
-- Build type : Release
-- Compile definitions : __STDC_FORMAT_MACROS
-- CMAKE_PREFIX_PATH :
-- CMAKE_INSTALL_PREFIX : /usr/local
-- CMAKE_MODULE_PATH :
--
-- ONNX version : 1.12.0
-- ONNX NAMESPACE : onnx
-- ONNX_USE_LITE_PROTO : OFF
-- USE_PROTOBUF_SHARED_LIBS : OFF
-- Protobuf_USE_STATIC_LIBS : ON
-- ONNX_DISABLE_EXCEPTIONS : OFF
-- ONNX_WERROR : OFF
-- ONNX_BUILD_TESTS : OFF
-- ONNX_BUILD_BENCHMARKS : OFF
-- ONNXIFI_DUMMY_BACKEND : OFF
-- ONNXIFI_ENABLE_EXT : OFF
--
-- Protobuf compiler : /usr/bin/protoc
-- Protobuf includes : /usr/include
-- Protobuf libraries : /usr/lib64/libprotobuf.so
-- BUILD_ONNX_PYTHON : ON
-- Python version :
-- Python executable : /usr/bin/python3
-- Python includes : /usr/include/python3.6m
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build
[ 1%] Running gen_proto.py on onnx/onnx.in.proto
[ 2%] Building C object CMakeFiles/onnxifi_loader.dir/onnx/onnxifi_loader.c.o
[ 4%] Building C object CMakeFiles/onnxifi_dummy.dir/onnx/onnxifi_dummy.c.o
[ 5%] Linking C static library libonnxifi_loader.a
Processing /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/onnx/onnx.in.proto
Writing /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-ml.proto
Writing /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-ml.proto3
generating /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx_pb.py
[ 7%] Linking C shared library libonnxifi_dummy.so
[ 8%] Running C++ protocol buffer compiler on /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-ml.proto
[ 8%] Built target onnxifi_dummy
[ 8%] Built target onnxifi_loader
[ 9%] Building C object CMakeFiles/onnxifi_wrapper.dir/onnx/onnxifi_wrapper.c.o
[ 11%] Linking C shared module libonnxifi.so
[ 11%] Built target onnxifi_wrapper
Writing mypy to onnx/onnx_ml_pb2.pyi
[ 11%] Built target gen_onnx_proto
[ 12%] Running gen_proto.py on onnx/onnx-operators.in.proto
[ 14%] Running gen_proto.py on onnx/onnx-data.in.proto
Processing /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/onnx/onnx-operators.in.proto
Writing /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-operators-ml.proto
Writing /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-operators-ml.proto3
generating /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx_operators_pb.py
Processing /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/onnx/onnx-data.in.proto
Writing /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-data.proto
Writing /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-data.proto3
generating /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx_data_pb.py
[ 16%] Running C++ protocol buffer compiler on /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-data.proto
[ 16%] Running C++ protocol buffer compiler on /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-operators-ml.proto
Writing mypy to onnx/onnx_data_pb2.pyi
Writing mypy to onnx/onnx_operators_ml_pb2.pyi
[ 16%] Built target gen_onnx_operators_proto
[ 16%] Built target gen_onnx_data_proto
[ 18%] Building CXX object CMakeFiles/onnx_proto.dir/onnx/onnx-ml.pb.cc.o
[ 19%] Building CXX object CMakeFiles/onnx_proto.dir/onnx/onnx-operators-ml.pb.cc.o
[ 21%] Building CXX object CMakeFiles/onnx_proto.dir/onnx/onnx-data.pb.cc.o
In file included from /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-data.pb.cc:4:0:
/tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-data.pb.h:17:2: error: #error This file was generated by an older version of protoc which is
#error This file was generated by an older version of protoc which is
^~~~~
In file included from /tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-operators-ml.pb.cc:4:0:
/tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-operators-ml.pb.h:17:2: error: #error This file was generated by an older version of protoc which is
#error This file was generated by an older version of protoc which is
^~~~~
/tmp/pip-install-vpn17m1g/onnx_58c50549dcbb43888cb76634cb6c4a2b/.setuptools-cmake-build/onnx/onnx-operators-ml.pb.h:18:2: error: #error incompatible with your Protocol Buffer headers. Please
#error incompatible with your Protocol Buffer headers. Please
^~~~~
looks like onnx ver 1.12.0 is not compatible with our protobuf headers. Can we upgrade to 1.13.0 which I've tested? @kiritigowda