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Is active learning working in MONAILabel?

Open patricio-astudillo opened this issue 3 years ago • 4 comments

Describe the bug I have detected an unwanted behaviour on monailabel (and monailabel-weekly). I'm using the deepedit app connected to an orthanc server where there are a number of patients with (18) and without (3) segmentation. Whenever I would like to select a 'next sample', the following screen appears:

image

I can not edit any field and whenever I click on 'ok', a crash occurs and an error message is shown:

image

I have already established the bug with @diazandr3s and he advised me to report this in a bug report.

patricio-astudillo avatar Feb 16 '22 14:02 patricio-astudillo

It looks like it couldn't fetch any meta/info for all the images/studies which were not annotated. Next sample result is EMPTY.. so click ok is not helpful.

The best way to check is use http://127.0.0.1:8000/dataset?output=all (you can use http://127.0.0.1:8000/ (and in dataset try option)

Is all the 18 images/series listed here? or is there some mandatory field missing.. like study id etc..?

SachidanandAlle avatar Feb 16 '22 15:02 SachidanandAlle

any updates?

SachidanandAlle avatar Apr 04 '22 10:04 SachidanandAlle

Yes, I checked this with @diazandr3s and we came to the conclusion that the dataset did not contain any series without labels. So if there are no 'empty' series initially (or anymore (but this needs to be checked)), the error occurs.

patricio-astudillo avatar Apr 04 '22 11:04 patricio-astudillo

possibly some check can be added in ohif

SachidanandAlle avatar May 19 '22 23:05 SachidanandAlle

please try the latest version. it comes with bunch of ui fixes.. please feel free to reopen the issue if problem persists

SachidanandAlle avatar Jan 12 '23 00:01 SachidanandAlle