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MONAI Label and OHIF 3

Open patricio-astudillo opened this issue 3 years ago • 10 comments

Hi @diazandr3s, @dannyrb and @SachidanandAlle,

I'm from the healthcare department of Robovision and we have a huge interest in using MONAI Label together with OHIF. Is there a plan to increase the functionalities of OHIF (with regards to the 3D capabilities e.g. segmentation)? And combine MONAI Label with the latest version (currently 3) of OHIF?

Thanks in advance, Patricio

patricio-astudillo avatar Feb 03 '22 13:02 patricio-astudillo

Thanks for raising this issue. Migrating to OHIF 3.x is part of future roadmap. Currently, we are looking for more contributions from OHIF/OpenSource community to get this migration done.

SachidanandAlle avatar Feb 04 '22 23:02 SachidanandAlle

@SachidanandAlle At OHIF we are also interested in getting MONAI Label to OHIF v3, maybe we can make a NAMIC Project Week project out of it (https://projectweek.na-mic.org/PW37_2022_Virtual/)

swederik avatar Feb 17 '22 09:02 swederik

@swederik That's good news! I would love to help but my knowledge of the scope of this migration is limited.

patricio-astudillo avatar Feb 17 '22 10:02 patricio-astudillo

@SachidanandAlle At OHIF we are also interested in getting MONAI Label to OHIF v3, maybe we can make a NAMIC Project Week project out of it (https://projectweek.na-mic.org/PW37_2022_Virtual/)

That's great.. we can schedule for a discussion and decide how we can proceed on this integration..

SachidanandAlle avatar Feb 17 '22 10:02 SachidanandAlle

Hi, Our team at AstraZeneca are also interested in this. We may be able to have a dedicated full-time resource to do the upgrade. In a nutshell, are you able to describe what the likely changes would be?

SamJBentley avatar Feb 08 '23 07:02 SamJBentley

I have not dig deep into version 3.. but I think there are significant changes on how the segment is created and managed compared to version 2..

But we welcome if some community members are willing to take this challenge and upgrade the plugin for version 3..

Xnat and Ohif 2 version plugin for Monailabel should be good references for this..

SachidanandAlle avatar Mar 09 '23 18:03 SachidanandAlle

Hi, Our team at AstraZeneca are also interested in this. We may be able to have a dedicated full-time resource to do the upgrade. In a nutshell, are you able to describe what the likely changes would be?

Hi @SamJBentley, care to discuss this?

patricio-astudillo avatar Mar 10 '23 07:03 patricio-astudillo

Hey all, we were funded CZI EOSS 5 (https://chanzuckerberg.com/eoss/proposals/enhancing-the-open-health-imaging-foundation-web-medical-imaging-framework/) and some of the scope involves the integration of the MONAI Label in OHIF v3. I wanted to start the discussion and maybe we setup monthly meetings with MONAI team and anyone who is interested. Please let me know who is the correct contact to reach out at MONAI (I only know @diazandr3s)

sedghi avatar Mar 10 '23 14:03 sedghi

@SachidanandAlle @swederik , @patricio-astudillo - I'm part of AstraZeneca team and can contribute Migrating to OHIF 3.x. Are you able to share major architectural changes which are preventing migration in 3.0/ It would be great if you can share any other guide/references for migration . Thanks

mrlella avatar Mar 19 '23 21:03 mrlella

https://github.com/Project-MONAI/MONAILabel/tree/main/plugins/ohif

SachidanandAlle avatar Mar 19 '23 21:03 SachidanandAlle