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Accession numbers list to functional/taxonomic list?

Open ereyred opened this issue 2 years ago • 0 comments

Hello, I have DP_GP_cluster outputs. I'm specifically looking at the optimal_clustering.txt file, which gives me the cluster name and a list of all the gene accession IDs in that cluster. How do I convert these gene IDs into information I can use, ie functional or taxonomic info on the genes in each cluster? Eg this cluster has mostly this function group, etc? Is there a way to export the cluster info and blast it or run it on a programme like Megan to look at the cluster profiles? I can look up each ID individually on NCBI but obviously that's not useful for long lists. Thanks so much! Any help from anyone will be much appreciated.

ereyred avatar Jan 10 '23 04:01 ereyred