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Job killed

Open ragak opened this issue 6 years ago • 2 comments

Hi I've been trying to run your program on my data set using a few different conditions, and every time it dies with the error "Killed: 9" after the Gibbs sampling. I am able to successfully run the test data, and my data is very similar, except larger. Does "Killed: 9" refer to a specific error? I couldn't find it in the DP_GP_cluster.py code, so I assume it's from some module that your code imports, but I wanted to check if you knew what it meant? Thank you.

ragak avatar Jun 13 '18 23:06 ragak

This is most likely a memory issue. I kept running into this issue until I ran the analysis on our cluster which then ran without error. If you run on a cluster like ours you might run into device error for which you have to uncomment the first ~4-5 lines in the DP_GP_cluster.py script

abayega avatar Jul 20 '18 15:07 abayega

Thank you! Yes it was a memory error

ragak avatar Nov 07 '18 20:11 ragak