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Consider replacing `ADMF` with `AF` in find-snvs output

Open timothymillar opened this issue 1 month ago • 0 comments

From the spec AF is

Allele frequency for each ALT allele in the same order as listed (estimated from primary data, not called genotypes)

So, it should be ok to calculate this as the mean of means as we are for ADMF and then drop the reference allele.

timothymillar avatar May 14 '24 21:05 timothymillar