Pinsplash

When saves are loaded, some entities spawned by the mod are programmed to persist through the save and keep the state they had at the time of loading, like Annoying...

HGSS S.S. Anne dock missing swarm conditions

3

location-area/349 has a 60% Wingull encounter when surfing listed, but according to Bulbapedia, it's a swarm-only encounter. The PokeAPI table is missing the swarm-yes condition for Wingull and swarm-no for...

alola location-area tables missing time conditions

1

these are the tables that need them: 1035, 1036, 1037, 1039, 1041, 1042, 1044, 1045, 1046, 1048, 1049, 1051, 1055, 1056, 1060, 1062, 1065, 1066, 1068, 1073, 1075, 1076, 1083,...

Johto Route 42 likely incorrect 1% Golbat encounter during day or morning in Crystal

4

The encounter chances add up to 101% if i recall correctly. It seems like it's just missing the time-night condition.

they should have a story progress condition or something

ancient-poni-path-area has the data for both Ancient Poni Path and Poni Breaker Coast. There is a separate table for Poni Breaker Coast as well so this doesn't make sense.