PhilPalmer

Thanks for your patience. I agree that the DeepVariant version definitely needs to be updated. I'm going to an nf-core hackathon 4-6th March so it could be a good opportunity...

Really sorry for the delay, I am definitely deserving of more than a bump 😅 This is something I've been meaning to do for a long while but never have...

Hi @AhmedArslan really sorry for the late reply, Unfortunately `bed` is a required argument so the pipeline will fail if it is not specified If you want to force it...

Hi @williamtjordan, sorry the pipeline isn't working as expected. I'm not immediately sure what is causing this error. Are you able to upload the `.nextflow.log` file which should be in...

Hi @williamtjordan, Sorry for taking a short while to getting round to testing this. I tested the first command you sent on an AWS instance (with a fresh install of...