Phelim Bradley

For this do you just need a kmer count? Have looked at hyperloglog recently - could be useful here. Rapid counting of unique kmer in low memory. On Thu, 10...

Very simple script here: https://github.com/Phelimb/hllcounter let me know if useful

@Owen-haha is this after the conversion with json_to_tsv? Do you know which version of Mykrobe your on? > fabG1/katG is the gene name Yup > W191G means the change of...

Yes, will try to add packages to these, thanks!

If you've used docker, there's a prepacked install there https://hub.docker.com/r/phelimb/bigsi/

Have you come across singularity http://singularity.lbl.gov/user-guide? I think they have better support for clusters and also support docker containers. I'll also make a conda package as I know containers aren't...

@Kadauchi have you received any update from the Chrome/Edge stores?