CuBIDS
CuBIDS copied to clipboard
Update pybids requirement from <=0.17.0 to <=0.17.2
Updates the requirements on pybids to permit the latest version.
Release notes
Sourced from pybids's releases.
0.17.2
Release Notes
Bug-fix release in the 0.17.x series.
Changes
- BUG: symlink dirs treated as files during indexing by
@cookpa
in bids-standard/pybids#1087New Contributors
@cookpa
made their first contribution in bids-standard/pybids#1087Full Changelog: https://github.com/bids-standard/pybids/compare/0.17.1...0.17.2
Changelog
Sourced from pybids's changelog.
Version 0.17.2 (September 19, 2024)
Bug-fix release in the 0.17.x series.
- BUG: symlink dirs treated as files during indexing (#1087)
Version 0.17.1 (September 06, 2024)
Bug-fix release in the 0.17.x series.
Mostly quiets down warnings generated by more recent versions of Pandas.
- FIX: Create indices with object dtype (#1084)
- MNT: Transfer validation tests to bids validator (#1081)
Version 0.17.0 (July 29, 2024)
Feature release in the 0.17.x series.
This release includes experimental support for MRS (BEP22) datasets and
universal_pathlib <https://github.com/fsspec/universal_pathlib>
__.
- ENH: pathlib -> universal_pathlib to enable cloud (and other filesystem) support (#1074)
- ENH: Add MRS entities, path patterns (#1075)
- STY: No parentheses after assert (#1065)
- MNT: Bump bids-examples from
47c4da1
to401f4cf
(#1073)- MNT: Fix typo newly found by codespell (#1066)
Version 0.16.5 (May 22, 2024)
Bug-fix release in the 0.16.x series.
This release includes minor fixes, but reworks the testing infrastructure and resolves Python 3.12 incompatibilities.
- FIX: Handle FileNotFoundError in BIDSLayout init when is_derivative=True and validate=False (#1049)
- FIX: Add dwi root sbref, missing dwi entities to path patterns (#1059)
- ENH: Update indexer to treat .zarr as files not dirs (#1046)
- DOC: Deal with several warnings and errors in the doc build (#1061)
- TST: Add bids-examples tests to cover ieeg, eeg, dwi (#1060)
- MNT: Add Python 3.12 support (#1057)
- MNT: Use tox to simplify testing environment setup (#1055)
- MNT: Bump codecov/codecov-action from 3 to 4 (#1041)
- MNT: Bump bids-examples from
1a000d6
toeff47f1
(#1039)- MNT: Bump bids-examples from
b6e5234
to1a000d6
(#1038)- MNT: Bump actions/upload-artifact from 3 to 4 (#1037)
... (truncated)
Commits
623f58d
REL: 0.17.298cf782
MNT: Update mailmap and Zenodo orderingfdb0cd9
Merge pull request #1088 from cookpa/cookpa-zenodo4dd026b
DOC: Update zenodo.json with new contributerfc692d2
Merge pull request #1085 from bids-standard/dependabot/submodules/bids-exampl...40c1028
test: Expect citation.cff in ds001b6d1b29
Merge pull request #1087 from cookpa/traverse_link_dirs6ecffc7
ENH: add a test for datasets with symlinkscdd3bc8
BUG: symlink dirs treated as files during indexing86c2818
Build(deps): Bump bids-examples from4460013
to7c18d68
- Additional commits viewable in compare view
Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase
.
Dependabot commands and options
You can trigger Dependabot actions by commenting on this PR:
-
@dependabot rebase
will rebase this PR -
@dependabot recreate
will recreate this PR, overwriting any edits that have been made to it -
@dependabot merge
will merge this PR after your CI passes on it -
@dependabot squash and merge
will squash and merge this PR after your CI passes on it -
@dependabot cancel merge
will cancel a previously requested merge and block automerging -
@dependabot reopen
will reopen this PR if it is closed -
@dependabot close
will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually -
@dependabot show <dependency name> ignore conditions
will show all of the ignore conditions of the specified dependency -
@dependabot ignore this major version
will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) -
@dependabot ignore this minor version
will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) -
@dependabot ignore this dependency
will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)