CuBIDS icon indicating copy to clipboard operation
CuBIDS copied to clipboard

Published 20 hours ago • verified publisher icon PennLINC

look into ancp bids

Open mattcieslak opened this issue 2 years ago • 4 comments

See how their layout compares, maybe run some speed tests on datalad-enabled bids datasets

mattcieslak avatar Sep 01 '22 15:09 mattcieslak

FYI there is WIP on the pybids front to incorporate ancp-bids layout to benefit from the speed bump

https://github.com/bids-standard/pybids/pull/863 https://github.com/bids-standard/pybids/pull/851

not sure when this will happen but thought I would let you know

Remi-Gau avatar Oct 22 '22 06:10 Remi-Gau

Oscar and Chris seem to have made a lot of progress on the integration, so hopefully the faster version of pybids will become available at some point early next year.

tsalo avatar Dec 19 '22 18:12 tsalo

Keeping this issue open, definitely a roadmap item for us!

scovitz avatar Feb 15 '23 00:02 scovitz

With 0.16.2, pybids should be 2-2.5x faster on large datasets.

There's also Greg Kiar and Connor Lane's new bids2table tool, which might fit with CuBIDS better.

tsalo avatar Sep 08 '23 13:09 tsalo