FastANI icon indicating copy to clipboard operation
FastANI copied to clipboard

Issue opening resulting .pdf of Visualize.R

Open russellj7 opened this issue 7 years ago • 1 comments

Hello, Sorry in advance for such a basic question.

I've generated the ". visual.pdf" file as demonstrated with the accompanying "visualize.R" script without any errors. However, I haven't found a program that is able to open the file on Mac (e.g. Preview, Adobe Reader). Trying to open the file returns a "file is damaged and could not be repaired/opened" error. Thinking it had something to do with the extension I changed it to just .pdf with no success.

Any suggestions on how to open the plot file?

Thanks!

russellj7 avatar Sep 04 '18 20:09 russellj7

Hi, can you double-check if you have genoPlotR library installed in R? Secondly, would it be possible to share the sequence of commands that you ran for FastANI and the script?

cjain7 avatar Sep 05 '18 22:09 cjain7