DSSP 4.0

This is a rewrite of DSSP, now offering full mmCIF support. The difference with previous releases of DSSP is that it now writes out an annotated mmCIF file by default, storing the secondary structure information in the _struct_conf category.

Another new feature in this version of DSSP is that it now defines Poly-Proline helices as well.

The DSSP program was designed by Wolfgang Kabsch and Chris Sander to standardize secondary structure assignment. DSSP is a database of secondary structure assignments (and much more) for all protein entries in the Protein Data Bank (PDB). DSSP is also the program that calculates DSSP entries from PDB entries.

DSSP does not predict secondary structure.

Requirements

The tools are based on libcif++ and the code is written in modern C++ so you need a compiler capable of handling C++17 code.

Building

Make sure you install libcif++ first before building.

After that, building should be as easy as typing:

git clone https://github.com/PDB-REDO/dssp.git
cd dssp
mkdir build
cd build
cmake ..
cmake --build . --config Release
ctest -C Release
cmake --install .

This will install the mkdssp program in $HOME/.local/bin. If you want to install elsewhere, specify the prefix with the CMAKE_INSTALL_PREFIX variable.

Usage

See manual page for more info.