Roadmap

[Hua-Zhou]

This issue documents the implementation roadmap for iterative solvers.

• [x] Convert GT data to Plink format (SnpData)
• [x] Subset VCF records according chromosome and position range
• [x] Subset VCF records according to marker index or IDs
• [x] Subset VCF samples according to individual index or names
• [ ] Convert methods for VCF.Reader, e.g., convert(Matrix{T}, reader::VCF.Reader) will convert all records from the current position of reader to a matrix of type Matrix{T}
• [ ] Copy methods for VCF.Reader, e.g., copy(A::AbstractMatrix{T}, reader::VCF.Reader) will fill the columns of A the GT data from the current position of reader