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Extending OpenMS for compress support
Multiple users are using quantms in AWS for FLQ and TMT analysis. One of the feature requests is to decrease the size of the intermediate files, ideXML, and consensusXML. We have been discussing this internally and would be great to have native support in OpenMS tools including the proteomicsLFQ, and the Search Adapters for compressed files. Please provide your feedback before starting the implementation @timosachsenberg.
Related to issue https://github.com/bigbio/quantms/issues/393