GateTools

GateTools copied to clipboard

parserMacro.py from pypi package

3

If I pip install gatetools with Python 3.10 and run `gate_split_and_run.py --help`, I get: ``` Traceback (most recent call last): File "/home/srit/miniconda3/envs/gt/bin/gate_split_and_run.py", line 16, in from parserMacro import * ModuleNotFoundError:...

SimonRit

Use an f-string rather than explicit concatenation of strings as this is incompatible, e.g., if filename is a Path object.

nkrah

with gt_dicom_rt_struct_to_image use gzip compression by default for the output mhd/raw binary image

dsarrut

With the branch https://github.com/OpenGATE/GateTools/tree/mergeTool , I want to create a tool to merge Gate jobs together. The jobs were previously create using cluster https://github.com/OpenGATE/GateTools/blob/mergeTool/clustertools/gate_split_and_run.py . First I want to list...

tbaudier

uproot3 -> uproot

4

I'm getting noisy messages that "uproot3" is now deprecated and we should use "uproot" instead, because python3 is now the default. A similarly noisy warning for "awkward0" which should now...

djboersma

tbaudier

gt_image_to_dicom_rt_struct ?

3

Hi all, Hi @djboersma , Do you think it's possible to create a tool converting binary mask to DicomRTStruct; the opposite of gt_dicom_rt_struct_to_image? Thank you

tbaudier

Method roi_utils.get_mask() does not work for HFP patient set up

2

Hi, I tried to use this tool in a radiotherapy simulation in which the patient was in head first prone position (HFP). The mhd image I am using has the...

Golpette

gt_image_arithm does not work for 4D images

dsarrut