Bug report -- runtime error with HDF5 (1.10.6)

[Schaffarczyk]

Bug description HDF5-DIAG: Error detected in HDF5 (1.10.6) thread 46912496523264: #000: ../../src/src/H5Pdcpl.c line 2025 in H5Pset_chunk(): all chunk dimensions must be positive major: Invalid arguments to routine minor: Out of range

To Reproduce

Steps to reproduce the behavior:

1. Compiled with CMAKE / make as deliverd
2. Run was via superDeliciousVanilla.turbine -parallel
3. Open: not know if an "opne" was the cause
4. See the error

HDF5-DIAG: Error detected in HDF5 (1.10.6) thread 46912496523264: #000: ../../src/src/H5Pdcpl.c line 2025 in H5Pset_chunk(): all chunk dimensions must be positive major: Invalid arguments to routine minor: Out of range [20] [72] [36] [20] [20] --> FOAM FATAL ERROR: [20] bad size -1 [20] [20] From function Foam::List<T>::List(Foam::label, const T&) [with T = Foam::Vector; Foam::label = int] [20] [72] [72] --> FOAM FATAL ERROR: [72] bad size -1 [72] [72] From function Foam::List<T>::List(Foam::label, const T&) [with T = Foam::Vector; Foam::label = int] [72] in file /sw/eng/OpenFOAM/6/skl/gcc/OpenFOAM-6/src/OpenFOAM/lnInclude/List.C at line in file /sw/eng/OpenFOAM/6/skl/gcc/OpenFOAM-6/src/OpenFOAM/lnInclude/List.C at line 61. [20] FOAM parallel run aborting

Expected behavior no crash !

OpenFAST Version

---

OpenFAST

Copyright (C) National Renewable Energy Laboratory Copyright (C) Envision Energy USA LTD

This program is licensed under Apache License Version 2.0 and comes with ABSOLUTELY NO WARRANTY. See the "LICENSE" file distributed with this software for details.

---

OpenFAST-HEAD-HASH-NOTFOUND Compile Info:

• Architecture: 64 bit
• Precision: double
• Date: Jul 20 2020
• Time: 09:25:35 Execution Info:
• Date: 07/20/2020
• Time: 09:33:08+0200

OpenFAST input file heading: FLLT test with OpenFAST 2020 07 17 / 1

Running ElastoDyn. Running BeamDyn. At line 1066 of file /home/shicfdfh/openfast-master/modules/beamdyn/src/BeamDyn_IO.f90 Fortran runtime warning: An array temporary was created for argument 'ary' of procedure 'readr8ary' At line 1076 of file /home/shicfdfh/openfast-master/modules/beamdyn/src/BeamDyn_IO.f90 Fortran runtime warning: An array temporary was created for argument 'ary' of procedure 'readr8ary' Running BeamDyn. Running BeamDyn. HDF5-DIAG: Error detected in HDF5 (1.10.6) thread 46912496523264:

note that the HPC I'm using is rather new.

[Schaffarczyk]

sorry . . . too much much buttons

[rafmudaf]

@gantech do you have any insight here?