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clean imported entities and update oeo-import-edits

Open stap-m opened this issue 2 years ago • 1 comments

Description of the issue

  • [x] Changes in imported entities should be done in oeo-import-edits, but are done anywhere, #1776
  • [ ] Some annotations are imported twice, e.g. from BFO and IAO. This has to be fixed
  • [x] In the hotfix 2.0.1 we changed unit and prefix in uo-extracted: #1742
    • duplicated SubClassOf
    • changed definition (unit)
    • This should be made a permanent change in oeo-import-edits / in the import script in the long run
  • [x] Clean RO annotations: move OEO-made annotations on RO relations into oeo-import-edits (many of them are stored in oeo-shared)

Ideas of solution

Tidy!

Workflow checklist

  • [ ] I discussed the issue with someone else than me before working on a solution
  • [ ] I already read the latest version of the workflow for this repository
  • [ ] The goal of this ontology is clear to me

I am aware that

  • [ ] every entry in the ontology should have a definition
  • [ ] classes should arise from concepts rather than from words

stap-m avatar Oct 24 '23 10:10 stap-m

  • [x] Clean RO annotations: move OEO-made annotations on RO relations into oeo-import-edits (many of them are stored in oeo-shared)

Taking care of this now.

stap-m avatar Dec 05 '23 14:12 stap-m

Seems to be solved.

stap-m avatar Apr 23 '24 09:04 stap-m