How can I convert the counts of chimera transcripts into FPKM or TPM?

[aijigekoukou-shen]

Hi,

Thank you for providing ChimeraTE, which is a very wonderful software that has been very helpful for my recent work. I have some questions while using it.

1. How can I merge TSV files from multiple replicates into a single table similar to the output from featurecounts?

2. How can I convert the counts of chimera transcripts into FPKM or TPM?

3. How to get the sequences of chimera transcripts?

Thanks