OPM
Installation problem on Ubuntu 24.04 inside conda environment
I am following this description of how to install pyopmspe11 and ran into an issue. Before doing the pip install I successfully installed the binary distribution of flow for Ubuntu 24.04 following this page. The installation of pyopmspe11 fails with the following message:
(pyopmspe11) rene@nb-00143:~$ pip install git+https://github.com/OPM/pyopmspe11.git
Collecting git+https://github.com/OPM/pyopmspe11.git
Cloning https://github.com/OPM/pyopmspe11.git to /tmp/pip-req-build-e00p7lxw
Running command git clone --filter=blob:none --quiet https://github.com/OPM/pyopmspe11.git /tmp/pip-req-build-e00p7lxw
Resolved https://github.com/OPM/pyopmspe11.git to commit 17233487c19ced039476e5da427a4b93b72aaf8a
Installing build dependencies ... done
Getting requirements to build wheel ... done
Preparing metadata (pyproject.toml) ... done
Collecting mako (from pyopmspe11==2024.4)
Downloading Mako-1.3.6-py3-none-any.whl.metadata (2.9 kB)
Collecting matplotlib (from pyopmspe11==2024.4)
Downloading matplotlib-3.9.2-cp313-cp313-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (11 kB)
Collecting pandas (from pyopmspe11==2024.4)
Downloading pandas-2.2.3-cp313-cp313-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (89 kB)
Collecting Pyarrow (from pyopmspe11==2024.4)
Downloading pyarrow-18.0.0-cp313-cp313-manylinux_2_28_x86_64.whl.metadata (3.3 kB)
INFO: pip is looking at multiple versions of pyopmspe11 to determine which version is compatible with other requirements. This could take a while.
ERROR: Could not find a version that satisfies the requirement resdata (from pyopmspe11) (from versions: none)
ERROR: No matching distribution found for resdata
I installed this in a conda environment. If I instead follow the instruction for a source install (second code box here) and install it in a virtual python environment the installation succeeds. Maybe there is a weird interaction why pip inside my conda environment doesnt find the correct version of resdata? Any advice would be appreciated, but also if conda is not supported it should probably be mentioned on the installation page.
Details of my environment:
OS: Ubuntu 24.04
Python: A clean conda environment with Python 3.13.0
conda list:
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_gnu conda-forge
bzip2 1.0.8 h4bc722e_7 conda-forge
ca-certificates 2024.8.30 hbcca054_0 conda-forge
ld_impl_linux-64 2.43 h712a8e2_2 conda-forge
libexpat 2.6.4 h5888daf_0 conda-forge
libffi 3.4.2 h7f98852_5 conda-forge
libgcc 14.2.0 h77fa898_1 conda-forge
libgcc-ng 14.2.0 h69a702a_1 conda-forge
libgomp 14.2.0 h77fa898_1 conda-forge
libmpdec 4.0.0 h4bc722e_0 conda-forge
libsqlite 3.47.0 hadc24fc_1 conda-forge
libuuid 2.38.1 h0b41bf4_0 conda-forge
libzlib 1.3.1 hb9d3cd8_2 conda-forge
ncurses 6.5 he02047a_1 conda-forge
openssl 3.4.0 hb9d3cd8_0 conda-forge
pip 24.3.1 pyh145f28c_0 conda-forge
python 3.13.0 h9ebbce0_100_cp313 conda-forge
python_abi 3.13 5_cp313 conda-forge
readline 8.2 h8228510_1 conda-forge
tk 8.6.13 noxft_h4845f30_101 conda-forge
tzdata 2024b hc8b5060_0 conda-forge
xz 5.2.6 h166bdaf_0 conda-forge
apt list libopm*:
libopm-common-bin/noble,now 2024.10-1~noble amd64 [installed,automatic]
libopm-common-dev/noble 2024.10-1~noble amd64
libopm-common-doc/noble,noble 2024.10-1~noble all
libopm-common/noble,now 2024.10-1~noble amd64 [installed,automatic]
libopm-grid-bin/noble,now 2024.10-1~noble amd64 [installed,automatic]
libopm-grid-dev/noble 2024.10-1~noble amd64
libopm-grid-doc/noble,noble 2024.10-1~noble all
libopm-grid/noble,now 2024.10-1~noble amd64 [installed,automatic]
libopm-material-dev/noble,noble 2024.10-1~noble all
libopm-material-doc/noble,noble 2024.10-1~noble all
libopm-models-dev/noble 2024.04-1~noble amd64
libopm-models-doc/noble,noble 2024.04-1~noble all
libopm-simulators-bin/noble,now 2024.10-1~noble amd64 [installed]
libopm-simulators-dev/noble 2024.10-1~noble amd64
libopm-simulators-doc/noble,noble 2024.10-1~noble all
libopm-simulators/noble,now 2024.10-1~noble amd64 [installed,automatic]
libopm-upscaling-bin/noble 2024.10-1~noble amd64
libopm-upscaling-dev/noble 2024.10-1~noble amd64
libopm-upscaling-doc/noble,noble 2024.10-1~noble all
libopm-upscaling/noble 2024.10-1~noble amd64
Does it work with python <3.13? This python version is quite new and might be related to your problem here. When you installed it in a python virtual environment, was it for the same python version?
Thanks @gassmoeller for raising this. This seems to be due to Python3.13 as @MatthewFlamm has commented, thanks. Now in the top of the installation of the documentation this has been added in https://github.com/OPM/pyopmspe11/pull/99:
Installation The following steps work installing the dependencies in Linux via apt-get or in macOS using brew or macports. While using packages managers such as Anaconda, Miniforge, or Mamba might work, these are not tested. In addition, the current supported Python versions for macOS are 3.10 to 3.12 and for Linux 3.8 to 3.12. We will update the documentation when Python3.13 is supported (e.g., the resdata Python package is not yet available via pip install in Python 3.13).
https://opm.github.io/pyopmspe11/installation.html
Thanks for documenting the issue. This solves the problem as far as https://github.com/openjournals/joss-reviews/issues/7357 is concerned, but I will leave this issue open so that you (and your users) can find it until python 3.13 is supported.