MedTagger MedTagger Output

Hello, I am trying to detect Delirium using MedTagger. So I have included the path of the delirium rules. But when I see the output I see MedTagger is detecting "cough" as the delirium-related word. So my question is does the MedTagger use only the rules I gave it or other rules related to different diseases alongside the rules I stated to give an output?

Nov 19 '22 00:11 MayeeshaHumaira

Hello,

Even I am getting the same issue. It is detecting other diseases even though delirium rules are given. Any idea or help on this ?

Nov 22 '22 23:11 nadimpas

Hi, This issue is actually known/we were working on a fix, basically the PASC aho-corasick lookup was hardcoded in by default and we were investigating why. This should now be fixed as of MedTagger v1.0.49

Nov 23 '22 02:11 qqndrew

Hey @qqndrew , The latest version does not process the output. The output file does not contain the predictions. Can you please check, I am trying to use Delirium rules from AgingNLP/delirium as ruledir.

Nov 23 '22 17:11 nadimpas

@sunyangfu would be better able to help you with above issue

Nov 23 '22 18:11 qqndrew

Yes, I have scheduled a time with @nadimpas to go over the issues

Nov 23 '22 19:11 sunyangfu