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Create a reference "Essential Ontology Curator Toolbox"

8

I would like to suggest to create a single page which provides 1. A list of essential tools for all Ontology curators to have installed 2. Some basic instruction to...

matentzn

Publicize MIRO guidelines better

3

@matentzn et al. published a very useful article a few (well, ok, 6) years ago: > Matentzoglu, N., Malone, J., Mungall, C. et al. MIRO: guidelines for minimum information for...

nlharris

In OBO slack @jclerman noted that he was playing with overriding the `git diff` command with a ROBOT diff invocation. @jclerman, would you be able to share a step by...

matentzn

Complete the Lesson: 'Ontology: Fundamentals' https://oboacademy.github.io/obook/lesson/ontology-fundamentals/

3

Some items in the “Learning objectives” section are not discussed in the "Preparation" section or elsewhere: - OWL ontology serializations ("formats") - What is a module? - Extraction methods: MIREOT...

paulacalipho

https://oboacademy.github.io/obook/howto/create-ontology-from-scratch/#basic-recipe-to-start-building-an-ontology In point 2 "this requires [research](https://oboacademy.github.io/obook/howto/lesson/ontology-term-use/#2-finding-good-ontologies)" the research link is broken. Not sure if it should point to: https://oboacademy.github.io/obook/lesson/ontology-term-use/#2-finding-good-ontologies ?

paulacalipho

Best way to download the obook for offline reading?

2

Hello! I am going to India for Biocuration 2024 and would love to have a PDF (or similar) version of the OBook to read in my long long flight. Do...

lubianat

This is a bit outside the general OBO purview, but at least add a link somewhere with https://code-review.org/

matentzn

Tutorial/documentation for application ontology

7

Requested by the ontologist in Allen institute There currently is this template that needs to be filled in: https://oboacademy.github.io/obook/lesson/application-ontology-development/

shawntanzk

Link to other open science initiatives and consider overlap

2

https://openlifesci.org/openseeds/

matentzn

Add how to join Slack or monarch-tutorials mailing list in OBOOK

1

I wonder if it would be helpful to have a section with links on joining the Slack and/or monarch-tutorials mailing list with information on who to contact (me?) for questions...

sagehrke