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Published 20 hours ago • verified publisher icon Novartis

Build Docker images with pre-installed PISCES

Open mdshw5 opened this issue 5 years ago • 1 comments

  • [x] Add a Dockerfile to define build process and entry point
  • [ ] Set up gh-actions to build docker images and publish to Docker hub

mdshw5 avatar Dec 02 '20 16:12 mdshw5

@guma44 I'll update this issue with progress and issues building a docker image. We should discuss how to integrate the container in Cromwell. I find this in the Cromwell docs - is it a relevant starting point? baseCommand can be the pisces command, but I'm not sure about specifying inputs/outputs.

mdshw5 avatar Dec 02 '20 16:12 mdshw5