NiftyNet
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Feature request for the Evaluation module
- It would be nice to have the possibility to calculate the evaluation measures within a given mask. For example, I have a brain CT and the corresponding inferred synthetic-CT, I want to evaluate the performance by computing MAE, RMSE, etc. but only within the head mask thus excluding the background air.
- I've also noticed that when running "evaluation" for a regression application, the results of MAE, RMSE, etc. are affected by the
volume_padding_size
andpixdim
values assigned in the config file. I believe that this is an issue that should be resolved as the purpose of the evaluation is just to compare the inferred with the ground truth images.