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Potential for multi-threading?

Open tseemann opened this issue 3 years ago • 1 comments

I assume parts of this algorithm could be parallelized. eg. using multoprocessing library What are your plans to do this?

tseemann avatar Mar 29 '22 21:03 tseemann

I am currently working on improving the code/algorithm (there is still substantial margin to reduce time and memory demands). At the same time I am in contact with other groups to have the idea implemented in C++ as part of other distributions (UShER and IQ-TREE), and possibly also in Java/BEAST. my suspicion is that it makes sense to invest in parallelization once in C++/Java rather than with this initial python version. However, if you think this would be easy to do, let me know (I have not used parallelization libraries in python before)!

NicolaDM avatar Mar 30 '22 08:03 NicolaDM