Nicholas-Schaub

Results 32 comments of Nicholas-Schaub

We just fixed the interleaved channel bug. @MosGeo, would you be able to share an example file so we can test against it? I know we can handle interleaved channels,...

Ah, well if single channel images are a deal breaker then the BioWriter probably will not be for you. We have plans to support multi-channel images, but we keep it...

@MosGeo I just tested the file you sent me using our latest development version. It looks like the issues are resolved. Let me know how it works. You should be...

@MosGeo We have released `bfio==2.3.0`. We just opened a PR for the writer implementation (#396) which should permit semi-scalable writing if you pass in a dask array into the writer....

I am currently wrapping our `bfio` library, and the underlying saving feature does this by default for OME zarr and OME tiff files. My plan is to use this functionality...

**Benchmarks** It seems like the `OmeTiledTiffWriter` performs best on either images larger than 256x256 pixels, and images with a large number of planes. Included in these graphs are the OmeZarrWriter,...

Is there an ETA on this?

Yes, please do add me as a maintainer. However, I am in the process of changing how the `bfio` Napari plugin works. Right now it's wrapped directly into the `bfio`...

Any updates on this? I am building a vscode extension that needs the environment set in vscode. I'm probably going to hack together a solution so I can continue building...

I think I actually figured out how to resolve this. It comes with only a few minor code changes. It basically works like this: 1. Get the path the current...