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Add ontology support

Open ajtritt opened this issue 7 years ago • 2 comments

Originally reported by: Andrew Tritt (Bitbucket: ajtritt, GitHub: ajtritt)


Spec objects should support adding ontology and ontology id


  • Bitbucket: https://bitbucket.org/lblneuro/pynwb/issue/15

ajtritt avatar Mar 23 '17 18:03 ajtritt

Related issues:

  • NWB Schema: https://github.com/NeurodataWithoutBorders/nwb-schema/issues/1
  • PyNWB issue with discussion from previous hackathon: https://github.com/NeurodataWithoutBorders/pynwb/issues/513
  • Related use case: https://github.com/NeurodataWithoutBorders/nwb-schema/issues/477

A solution for this is currently being developed in HDMF:

  • https://hdmf.readthedocs.io/en/stable/tutorials/External_Resources.html#sphx-glr-tutorials-external-resources-py

oruebel avatar Sep 10 '21 23:09 oruebel

@rly , @oruebel I'm thinking about creating a tutorial in PyNWB to illustrate best practices in using ndx-external-resources. What do you think?

bendichter avatar Feb 24 '23 20:02 bendichter