Unimod / PSI Mod ontology support

[prvst]

Add support for different modifications ontologies and make it possible to define modifications names on the parameter file.

[Nazrath10R]

I am planning to do an "exhaustive" search with many PTMs. Is there any way to add or specify variable mods using UniMod id, PSI Mod or import from SearchGUI etc.?

[anesvi]

MSFragger is not the best tool for exhaustive” PTM search. It will run out of memory. Instead, you can do open search, and then see what mass shifts you identify and what entries in UniMod they map to

From: Nazrath [mailto:[email protected]] Sent: Wednesday, July 24, 2019 3:52 PM To: Nesvilab/MSFragger [email protected] Cc: Subscribed [email protected] Subject: Re: [Nesvilab/MSFragger] Unimod / PSI Mod ontology support (#23)

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I am planning to do an "exhaustive" search with many PTMs. Is there any way to add or specify variable mods using UniMod id, PSI Mod or import from SearchGUI etc.?

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