FragPipe icon indicating copy to clipboard operation
FragPipe copied to clipboard

Feature request: Detailed reporting of identified fragment ions

Open StefanTenzer opened this issue 1 year ago • 2 comments

Dear Fragpipe Team, thanks for your amazing work! We are currently trying to extract information at fragment ion level from FragPipe results. Ideally, we would need a report file that provides addition information at the fragment ion level for each identified PSM (in the psm.tsv) , i.e. observed product_MZ, theoretical_product_MZ, Intensity, Annotation. This file will likely be relatively large in size, but ideal for e.g. visualization of the identified spectra.

Best regards,

Stefan Tenzer

StefanTenzer avatar Nov 14 '22 11:11 StefanTenzer