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DB annotation Error message: panic: runtime error: index out of range [1] with length 0
- Describe the issue or question: Hi, FragPipe Team
I've got the error message of "panic: runtime error: index out of range [1] with length 0" at the DBAnnotate stage when running FragPipe using "LFQ-MBR.workflow". The error can be fixed by converting the fasta DB like ">xx" to ">xx|xx|xx" in windows, but cannot be fixed in linux in the same way. I do not know how this happened and how to solve the problem in linux run. Attached the original DB, converted DB, log in windows and log in linux. Thanks for your time!
best, Yingying
- Upload your log file (If a log file hasn't b FP_problem.zip een generated, go to the 'Run' tab in FragPipe, click 'Export Log', zip the resulting "log_[date_time].txt" file to avoid truncation, then attach the zipped file by drag & drop here.)