FragPipe
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custom added protein with '-' in the name is filtered out by Philosopher from the reports
I found an issue (or rediscovered?) I have a custom database with a sequence of high abundant, spike in protein. If I add the sequence as
alphaamylase it is identified just fine
if I add as >alpha-amylase Philosopher removes it from the report, it's gone
Is there a reason we cannot allow it? At least we should give a warning.
We don't have any rules prohibiting dashes in the names
@prvst I think we fixed this?
yes, its fixed