FragPipe icon indicating copy to clipboard operation
FragPipe copied to clipboard

custom added protein with '-' in the name is filtered out by Philosopher from the reports

Open anesvi opened this issue 2 years ago • 1 comments

I found an issue (or rediscovered?) I have a custom database with a sequence of high abundant, spike in protein. If I add the sequence as

alphaamylase it is identified just fine

if I add as >alpha-amylase Philosopher removes it from the report, it's gone

Is there a reason we cannot allow it? At least we should give a warning.

anesvi avatar Jun 25 '22 18:06 anesvi

We don't have any rules prohibiting dashes in the names

prvst avatar Jun 27 '22 15:06 prvst

@prvst I think we fixed this?

anesvi avatar Sep 06 '22 20:09 anesvi

yes, its fixed

prvst avatar Sep 06 '22 20:09 prvst