%ID data

[AmirWIS]

Hi, as a QC, I usually compare the %ID I get in each experiment (i.e. #PSMs vs. total MSMS scans). Where do I find those values in the FragPipe output? Thanks.

[anesvi]

We do not have it yet. But we know this would be nice to add, we will discuss adding it in a future release

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Hi, as a QC, I usually compare the %ID I get in each experiment (i.e. #PSMs vs. total MSMS scans). Where do I find those values in the FragPipe output? Thanks.

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[prvst]

We discussed adding something like that to Philosopher before, but a summary tab in FragPipe would be better.

[fcyu]

It is a duplicate of https://github.com/Nesvilab/FragPipe/issues/200