FragPipe
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Adjust `I` and `L` in the psm.tsv, peptide.tsv, and ion.tsv after razor assignment
The razor assignment might make an alternative protein as the razor protein. Since we don't distinguish I
and L
in the protein mapping, some peptides might not exist in their razor protein. Need to change some I
to L
, or L
to I
after razor assignment, so that the peptides in the tsv files are correct.
Best,
Fengchao