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Published 20 hours ago • verified publisher icon Nesvilab

Diagnostic Ion mining crashed

Open Dobrokhotov1989 opened this issue 9 months ago • 2 comments

Hi there,

I was running Diagnostic ion mining workflow that finished with the following message:

Identifying candidate ions Building feature histograms Exception in thread "main" java.lang.NullPointerException at edu.umich.andykong.ptmshepherd.diagnosticmining.DiagnosticPeakPicker.process(DiagnosticPeakPicker.java:260) at edu.umich.andykong.ptmshepherd.PTMShepherd.main(PTMShepherd.java:637) Testing histogram peaks for significance

After this, the processor essentially is not engaged (based on the Task Manager) and after 15 min or so of waiting, I've aborted further execution. Am I not patient enough or is it an actual bug?

I'm using an 18-core workstation with 128 GB RAM and Windows OS.

Log file: log_2024-05-22_16-31-50.zip

Dobrokhotov1989 avatar May 28 '24 16:05 Dobrokhotov1989