BioNeMo

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nccl timeout when using default training configs

1

I am using the default configs, code and data to train a model within BioNeMo framework. The timeout occurs at the middle of the training. Based on the error logs,...

pengzhangzhi

Bumps [transformers](https://github.com/huggingface/transformers) from 4.17.0 to 4.30.0. Release notes Sourced from transformers's releases. v4.30.0: 100k, Agents improvements, Safetensors core dependency, Swiftformer, Autoformer, MobileViTv2, timm-as-a-backbone 100k Transformers has just reached 100k stars...

dependabot[bot]

Alphafold2 NIM performance tuning bug

1

If you attempt to tune the performance of the [AlphaFold's sequence to MSA function](https://docs.nvidia.com/nim/bionemo/alphafold2/latest/performance.html#sequence-to-msa), the API returns a 500 Error. This error is caused by the way the lack of...

robo-cap

Hello, I tried running the following code using your example for the Docker-based msa-search, but encountered an error. ``` import requests import json MSA_HOST = 'http://0.0.0.0:8701' def main(): NIM_URL_FULL_PATH =...

danid77

Bumps [transformers](https://github.com/huggingface/transformers) from 4.51.3 to 4.53.0. Release notes Sourced from transformers's releases. Release v4.53.0 Gemma3n Gemma 3n models are designed for efficient execution on low-resource devices. They are capable of...

dependabot[bot]