WARNING: Reallocation of zero size attempted. This is probably a bug. Problems may follow

[473021677]

Hello I am using MrBayes v3.2.7a to conduct bayesian inference analysis but the program aborted abnormally. It showed the errors "Setting number of generations to 2000000 WARNING: Reallocation of zero size attempted. This is probably a bug. Problems may follow. WARNING: Reallocation of zero size attempted. This is probably a bug. Problems may follow. Setting number of runs to 4 WARNING: Allocation of zero size attempted. This is probably a bug; problems may follow. =================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 17616 RUNNING AT localhost.localdomain = EXIT CODE: 9 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES =================================================================================== YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Killed (signal 9) This typically refers to a problem with your application. Please see the FAQ page for debugging suggestions". The commands were "execute /home/lianzh/yuanyang/50.concatenated-v2.nex prset aamodelpr=fixed(lg) lset rates=invgamma ngammacat=8 mcmc ngen=2000000 nruns=4 nchains=8 samplefreq=2000 printfreq=2000 diagnfreq=2000 relburnin=yes burninfrac=0.25 Temp=0.15 yes sump sumt". I have searched the website “https://github.com/NBISweden/MrBayes/issues/70” and found that someone have encountered similar problems. However, I don't know how to solve it. I will be eager to get your guidance. I have appended the files. Thanks very much.

Best regards 50.concatenated-v2.nex.txt nohup.out.txt

[zhangchicool]

This issue has been fixed, see #70 #28, but hasn't been released yet. I think the new release is coming soon. The program termination is not expected. Normally the program will continue running without error, not sure if there is another bug causing the termination.

[473021677]

Thanks for your comment. The program aborted for the nex file of 50 concatenated proteins. However, when I using the nex file of 16 concatenated ribosomal proteins, the result tree file could be generated, despite the same warning "WARNING: Reallocation of zero size attempted. This is probably a bug. Problems may follow.". I suspected if there were some wrong with the nex file of 50 concatenated proteins. I have appended the two nex files. Could you help me check the files? Thanks very much.

Best regards 16rp.concatenated.nex.txt 50.concatenated-v2.nex.txt