drep
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dRep facing error while installing by conda
conda config --add channels bioconda; conda install drep
Warning: 'bioconda' already in 'channels' list, moving to the top Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source. Collecting package metadata (repodata.json): done Solving environment: | The environment is inconsistent, please check the package plan carefully The following packages are causing the inconsistency:
Could you please suggest some ideas many thanks
Try making a new environment, e.g. with the command:
conda create -n drep drep
thanks for answering me I have executed the command, and installation finished with this - Preparing transaction: done Verifying transaction: done Executing transaction: done ERROR conda.core.link:_execute(730): An error occurred while installing package 'defaults::scikit-learn-1.0.2-py37h51133e4_1'. Rolling back transaction: done
I am getting this error now : (drep)alifchebbi@amberjack:/tmp$ dRep check_dependencies Command 'dRep' not found, did you mean: Really appreciate your help.
Hello-
Unfortunately this seems to be an error with scikit-learn
, which I don't know how to troubleshoot.
You could try installing with pip instead? E.g.:
pip install drep
-Matt
Good evening again I have tried with pip before but when I try to execute the command I get an error of drep command not found.
Sorry @poddarharsh15 , but I don't think I can help troubleshoot this issue any further. Something about your systems specific python setup is wrong
Best, Matt