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dRep facing error while installing by conda

Open poddarharsh15 opened this issue 1 year ago • 4 comments

conda config --add channels bioconda; conda install drep

Warning: 'bioconda' already in 'channels' list, moving to the top Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source. Collecting package metadata (repodata.json): done Solving environment: | The environment is inconsistent, please check the package plan carefully The following packages are causing the inconsistency:

Could you please suggest some ideas many thanks

poddarharsh15 avatar Jul 28 '22 14:07 poddarharsh15

Try making a new environment, e.g. with the command:

conda create -n drep drep

MrOlm avatar Jul 28 '22 15:07 MrOlm

thanks for answering me I have executed the command, and installation finished with this - Preparing transaction: done Verifying transaction: done Executing transaction: done ERROR conda.core.link:_execute(730): An error occurred while installing package 'defaults::scikit-learn-1.0.2-py37h51133e4_1'. Rolling back transaction: done

I am getting this error now : (drep)alifchebbi@amberjack:/tmp$ dRep check_dependencies Command 'dRep' not found, did you mean: Really appreciate your help.

poddarharsh15 avatar Jul 28 '22 15:07 poddarharsh15

Hello-

Unfortunately this seems to be an error with scikit-learn, which I don't know how to troubleshoot.

You could try installing with pip instead? E.g.:

pip install drep

-Matt

MrOlm avatar Jul 28 '22 15:07 MrOlm

Good evening again I have tried with pip before but when I try to execute the command I get an error of drep command not found.

poddarharsh15 avatar Jul 28 '22 15:07 poddarharsh15

Sorry @poddarharsh15 , but I don't think I can help troubleshoot this issue any further. Something about your systems specific python setup is wrong

Best, Matt

MrOlm avatar Nov 02 '22 00:11 MrOlm