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PSA: pubchem loose (name_type=word) searches failing

Open loriab opened this issue 1 year ago • 2 comments

pubchem rest api name_type=word that this module uses for loose (e.g., water*) searches appears to be broken. Compare:

  • FAIL https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/name/tropolone/property/IUPACName,MolecularFormula,Charge/JSON?name_type=word
  • FINE https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/name/tropolone/property/IUPACName,MolecularFormula,Charge/JSON?name_type=complete
  • FINE https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/name/tropolone/property/IUPACName,MolecularFormula,Charge/JSON

The name_type=word links at PubChem's own documentation https://pubchem.ncbi.nlm.nih.gov/docs/pug-rest#section=SIDS-CIDS-AIDS are failing, and this was all fine yesterday, so I'm not changing qcel code just yet. For now, one test will fail. avoid with -k "not pubchem_multiout_g"

loriab avatar Jun 19 '24 14:06 loriab

Looks to be fixed. What an odd partial outage.

loriab avatar Jun 19 '24 15:06 loriab

This pubchem error is active again. :-(

loriab avatar Oct 08 '24 16:10 loriab