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Deposit calculated values for provided files when available

Open davidlmobley opened this issue 8 years ago • 5 comments

To move this in the direction of helping people benchmark, we should provide calculated values from gold standard calculations with the provided files, when available. These should be in a markdown file in the relevant directory, I think.

@nhenriksen - is this something you're able to add? I think you have values for all of the files you've deposited?

@GHeinzelmann - I think you may not?

@Janeyin600 - do you?

At some point we'll actually need to repeat the lysozyme calculations (or another group will) and get input files for those, and calculated values, in here as well.

davidlmobley avatar Aug 25 '17 14:08 davidlmobley

@andrrizzi and @lnaden are actively working to use YANK to repeat host-guest and lysozyme calculations right now.

jchodera avatar Aug 25 '17 15:08 jchodera

I do have all the files from my BRD4 calculations stored, I can organize them and add to the input files if needed.

GHeinzelmann avatar Aug 25 '17 15:08 GHeinzelmann

@davidlmobley yes, I can add these!

nhenriksen avatar Aug 25 '17 15:08 nhenriksen

@jchodera

@andrrizzi and @Lnaden are actively working to use YANK to repeat host-guest and lysozyme calculations right now.

Yes, that's where I'm hoping the results and files will come from!

davidlmobley avatar Aug 25 '17 15:08 davidlmobley

@davidlmobley I can add those

ghost avatar Aug 25 '17 17:08 ghost