bam2wig
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MikeAxtell
Conversion of a BAM alignment to wiggle and bigwig coverage files, with flexible reporting options
On GitHub’s project page, release v1.5 is still shown as the latest release on the site. I guess because v1.6 is just a tag or so. It also looks different...
Dear Micheal, I got an error message when I use your script using the -g reference mode. See the following message: *** FATAL: The loci defined in your GFF3 file...
Current version (1.4) gives incorrect results for alignments with indels, introns, or clipping relative to the reference. Major issue! Thanks to Jiyoung Lee for finding this.
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Conversion of a BAM alignment to wiggle and bigwig coverage files, with flexible reporting options