Moritz E. Beber

Git is not a Python package unfortunately. You can install it with `conda install git` or since you seem to work on Windows you can install it via https://gitforwindows.org/.

There is another issue here asking for the same and someone has provided this feature. https://github.com/DerrickWood/kraken2/issues/233#issuecomment-629775384

Couldn't you extract that from MetaNetX right now?

Agreed, we just talked about this today!

In older networkx versions the graph generator functions had an argument `create_using` so that you should be able to do: ``` python g = EventfulGraph() g = nx.erdos_renyi(100, 0.1, create_using=g)...

Hi @jenniferlu717, Similarly to the other folks posting here, I was wondering about what kind of read length I should build a database for. I'm analyzing a fairly diverse dataset...

I've been thinking a bit more about this and I'm actually wondering if Bracken is needed at all for long reads. I wonder if someone here has more experience because...

I don't have a real answer but I can say that we decided to not run Bracken on nanopore reads for [taxprofiler](https://github.com/nf-core/taxprofiler/issues/167).

Hi, I'm working on moving MEMOTE to a new server but it's taking longer than I'd like. (Tough to find time in the evenings.) I'll let you know when it's...

Unfortunately, there were a number of things still to fix with the software itself. Those are now resolved, so I hope to follow with the webservice soon.